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BMCBI
2008
154views more  BMCBI 2008»
14 years 10 months ago
GeNESiS: gene network evolution simulation software
Background: There has been a lot of interest in recent years focusing on the modeling and simulation of Gene Regulatory Networks (GRNs). However, the evolutionary mechanisms that ...
Anton Kratz, Masaru Tomita, Arun Krishnan
ICES
2010
Springer
128views Hardware» more  ICES 2010»
14 years 8 months ago
Evolution and Analysis of a Robot Controller Based on a Gene Regulatory Network
Abstract. This paper explores the application of an artificial developmental system (ADS) to the field of evolutionary robotics by investigating the capability of a gene regulatory...
Martin Trefzer, Tüze Kuyucu, Julian F. Miller...
BMCBI
2006
143views more  BMCBI 2006»
14 years 10 months ago
Discovering functional gene expression patterns in the metabolic network of Escherichia coli with wavelets transforms
Background: Microarray technology produces gene expression data on a genomic scale for an endless variety of organisms and conditions. However, this vast amount of information nee...
Rainer König, Gunnar Schramm, Marcus Oswald, ...
BIOINFORMATICS
2007
66views more  BIOINFORMATICS 2007»
14 years 10 months ago
Gene expression network analysis and applications to immunology
We address the problem of using expression data and prior biological knowledge to identify differentially expressed pathways or groups of genes. Following an idea of Ideker et al...
Serban Nacu, Rebecca Critchley-Thorne, Peter Lee, ...
EVOW
2008
Springer
14 years 11 months ago
Learning Gaussian Graphical Models of Gene Networks with False Discovery Rate Control
In many cases what matters is not whether a false discovery is made or not but the expected proportion of false discoveries among all the discoveries made, i.e. the so-called false...
Jose M. Peña