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BIBE
2006
IEEE
139views Bioinformatics» more  BIBE 2006»
15 years 3 months ago
A Computational Inference Framework for analyzing Gene Regulation Pathway using Microarray Data
Microarray experiments produce gene expression data at such a high speed and volume that it is imperative to use highly specialized computational tools for their analyses. One grou...
Dong-Guk Shin, John Bluis, Yoo Ah Kim, Winfried Kr...
JCB
2006
83views more  JCB 2006»
14 years 9 months ago
A Discrete-Event Approach to Transcription Control with Dynamic Event-Controllability
This paper presents a discrete-event approach to synthesis of transcription control for a class of (computational) gene networks. Given a set of genes and protein-gene and/or prote...
Peter C. Y. Chen
BMCBI
2008
201views more  BMCBI 2008»
14 years 9 months ago
A copula method for modeling directional dependence of genes
Background: Genes interact with each other as basic building blocks of life, forming a complicated network. The relationship between groups of genes with different functions can b...
Jong-Min Kim, Yoon-Sung Jung, Engin A. Sungur, Kap...
70
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ISMB
2007
14 years 12 months ago
Annotating gene function by combining expression data with a modular gene network
Motoki Shiga, Ichigaku Takigawa, Hiroshi Mamitsuka
RECOMB
2007
Springer
15 years 10 months ago
An Efficient Method for Dynamic Analysis of Gene Regulatory Networks and in silico Gene Perturbation Experiments
With the increasing availability of experimental data on gene-gene and protein-protein interactions, modeling of gene regulatory networks has gained a special attention lately. To ...
Abhishek Garg, Ioannis Xenarios, Luis Mendoza, Gio...