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» Computation in Gene Networks
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ICPPW
2009
IEEE
14 years 7 months ago
Characterizing the Performance of
Using Linux for high-performance applications on the compute nodes of IBM Blue Gene/P is challenging because of TLB misses and difficulties with programming the network DMA engine...
Kazutomo Yoshii, Kamil Iskra, Harish Naik, Pete Be...
BMCBI
2006
129views more  BMCBI 2006»
14 years 10 months ago
Functional clustering of yeast proteins from the protein-protein interaction network
Background: The abundant data available for protein interaction networks have not yet been fully understood. New types of analyses are needed to reveal organizational principles o...
Taner Z. Sen, Andrzej Kloczkowski, Robert L. Jerni...
GCB
2009
Springer
196views Biometrics» more  GCB 2009»
14 years 7 months ago
Comparative Generalized Logic Modeling Reveals Differential Gene Interactions during Cell Cycle Exit in Drosophila Wing Developm
Abstract: A comparative interaction detection paradigm is proposed to study the complex gene regulatory networks that control cell proliferation during development. Instead of atte...
Mingzhou Song, Chung-Chien Hong, Yang Zhang, Laura...
FORMATS
2007
Springer
15 years 4 months ago
On Timed Models of Gene Networks
Abstract. We present a systematic translation from timed models of genetic regulatory networks into products of timed automata to which one can apply verification tools in order l...
Grégory Batt, Ramzi Ben Salah, Oded Maler