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» Computation of Homology Groups and Generators
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BMCBI
2011
14 years 6 months ago
A quality metric for homology modeling: the H-factor
Background: The analysis of protein structures provides fundamental insight into most biochemical functions and consequently into the cause and possible treatment of diseases. As ...
Eric di Luccio, Patrice Koehl
ICPR
2008
IEEE
15 years 6 months ago
Linear time recognition algorithms for topological invariants in 3D
In this paper, we design linear time algorithms to recognize and determine topological invariants such as genus and homology groups in 3D. These invariants can be used to identify...
Li Chen, Yongwu Rong
ISMB
2007
15 years 2 months ago
Automatic genome-wide reconstruction of phylogenetic gene trees
Gene duplication and divergence is a major evolutionary force. Despite the growing number of fully sequenced genomes, methods for investigating these events on a genome-wide scale...
Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Reg...
IJAC
2010
67views more  IJAC 2010»
14 years 10 months ago
On Fox Quotients of Arbitrary Group Algebras
For a group G and N-series G of G let In R,G(G), n ≥ 0, denote the filtration of the group algebra R(G) induced by G , and IR(G) its augmentation ideal. For subgroups H of G, l...
Manfred Hartl
BMCBI
2005
94views more  BMCBI 2005»
14 years 11 months ago
Computational identification of strain-, species- and genus-specific proteins
Background: The identification of unique proteins at different taxonomic levels has both scientific and practical value. Strain-, species- and genus-specific proteins can provide ...
Raja Mazumder, Darren A. Natale, Sudhir Murthy, Ra...