The growing computational and storage needs of several scientific applications mandate the deployment of extreme-scale parallel machines, such as IBM’s Blue Gene/L which can acc...
Cluster methods have been successfully applied in gene expression data analysis to address tumor classification. By grouping tissue samples into homogeneous subsets, more systema...
The mechanism of gene regulation has been studied intensely for decades. It is important to identify synergistic transcriptional motifs. Its search space is so large that an effici...
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
Many large-scale clusters now have hundreds of thousands of processors, and processor counts will be over one million within a few years. Computational scientists must scale their ...
Bradley J. Barnes, Jeonifer Garren, David K. Lowen...