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» Computation of Median Gene Clusters
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CEC
2009
IEEE
15 years 4 months ago
A Bacterial Evolutionary Algorithm for automatic data clustering
This paper describes an evolutionary clustering algorithm, which can partition a given dataset automatically into the optimal number of groups through one shot of optimization. The...
Swagatam Das, Archana Chowdhury, Ajith Abraham
BMCBI
2005
136views more  BMCBI 2005»
14 years 9 months ago
Identification of clustered microRNAs using an ab initio prediction method
Background: MicroRNAs (miRNAs) are endogenous 21 to 23-nucleotide RNA molecules that regulate protein-coding gene expression in plants and animals via the RNA interference pathway...
Alain Sewer, Nicodème Paul, Pablo Landgraf,...
NAR
2011
214views Computer Vision» more  NAR 2011»
14 years 14 days ago
starBase: a database for exploring microRNA-mRNA interaction maps from Argonaute CLIP-Seq and Degradome-Seq data
MicroRNAs (miRNAs) represent an important class of small non-coding RNAs (sRNAs) that regulate gene expression by targeting messenger RNAs. However, assigning miRNAs to their regu...
Jian-Hua Yang, Jun-Hao Li, Peng Shao, Hui Zhou, Yu...
CGF
2008
142views more  CGF 2008»
14 years 9 months ago
Visualizing Genome Expression and Regulatory Network Dynamics in Genomic and Metabolic Context
DNA microarrays are used to measure the expression levels of thousands of genes simultaneously. In a time series experiment, the gene expressions are measured as a function of tim...
Michel A. Westenberg, Sacha A. F. T. van Hijum, Os...
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DAGSTUHL
2007
14 years 11 months ago
Correlation-based Data Representation
The Dagstuhl Seminar Similarity-based Clustering and its Application to Medicine and Biology (07131) held in March 25–30, 2007, provided an excellent atmosphere for in-depth disc...
Marc Strickert, Udo Seiffert