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    BMCBI
    2006
    179views more  BMCBI 2006»
    Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
    14 years 9 months ago
    Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
    Download  www.dtc.umn.edu
    Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
    Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
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    BMCBI
    2004
    123views more  BMCBI 2004»
    A two-way interface between limited Systems Biology Markup Language and R
    14 years 9 months ago
    A two-way interface between limited Systems Biology Markup Language and R
    Download  www.biomedcentral.com
    Background: Systems Biology Markup Language (SBML) is gaining broad usage as a standard for representing dynamical systems as data structures. The open source statistical programm...
    Tomas Radivoyevitch
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    MMS
    1998
    114views Information Technology» more  MMS 1998»
    Packet Audio Playout Delay Adjustment: Performance Bounds and Algorithms
    14 years 9 months ago
    Packet Audio Playout Delay Adjustment: Performance Bounds and Algorithms
    Download  www-inst.eecs.berkeley.edu
    In packet audio applications, packets are buffered at a receiving site and their playout delayed in order to compensate for variable network delays. In this paper, we consider the ...
    Sue B. Moon, James F. Kurose, Donald F. Towsley
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    JPDC
    2007
    167views more  JPDC 2007»
    On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
    14 years 9 months ago
    On the design of high-performance algorithms for aligning multiple protein sequences on mesh-based multiprocessor architectures
    Download  www.cc.gatech.edu
    In this paper, we address the problem of multiple sequence alignment (MSA) for handling very large number of proteins sequences on mesh-based multiprocessor architectures. As the ...
    Diana H. P. Low, Bharadwaj Veeravalli, David A. Ba...
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    ICPP
    2009
    IEEE
    133views Distributed And Parallel Com...» more  ICPP 2009»
    Code Semantic-Aware Runahead Threads
    15 years 4 months ago
    Code Semantic-Aware Runahead Threads
    Download  capinfo.e.ac.upc.edu
    Memory-intensive threads can hoard shared resources without making progress on a multithreading processor (SMT), thereby hindering the overall system performance. A recent promisi...
    Tanausú Ramírez, Alex Pajuelo, Olive...
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