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ISMB
1994
14 years 11 months ago
Using Interval Logic for Order Assembly
Temporallogic, in particular, interval logic has been used to represent genomemapsand to assist genome mapconstructions. However,interval logic itself appears to be bruited in its...
Zhan Cui
BMCBI
2007
102views more  BMCBI 2007»
14 years 10 months ago
Understanding and using the meaning of statements in a bio-ontology: recasting the Gene Ontology in OWL
The bio-ontology community falls into two camps: first we have biology domain experts, who actually hold the knowledge we wish to capture in ontologies; second, we have ontology s...
Mikel Egaña Aranguren, Sean Bechhofer, Phil...
CIBCB
2008
IEEE
15 years 4 months ago
Temporal and structural analysis of biological networks in combination with microarray data
— We introduce a graph-based relational learning approach using graph-rewriting rules for temporal and structural analysis of biological networks changing over time. The analysis...
Chang Hun You, Lawrence B. Holder, Diane J. Cook
ASM
2010
ASM
15 years 7 months ago
Towards Validation of Requirements Models
Abstract. The aim of this paper is to gradually introduce formalism in the requirement engineering phase in order to facilitate its validation. We analyze and elicit our requiremen...
Atif Mashkoor, Abderrahman Matoussi
ASM
2005
ASM
15 years 3 months ago
CoreASM: An Extensible ASM Execution Engine
In this paper we introduce a new research effort in making state machines executable. The aim is to specify and implement an execution engine for a language that is as close as po...
Roozbeh Farahbod, Vincenzo Gervasi, Uwe Gläss...