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ACMSE
2006
ACM
15 years 1 months ago
Phoenix-based clone detection using suffix trees
A code clone represents a sequence of statements that are duplicated in multiple locations of a program. Clones often arise in source code as a result of multiple cut/paste operat...
Robert Tairas, Jeff Gray
ESANN
2006
15 years 1 months ago
Dynamical reservoir properties as network effects
It has been proposed that chaos can serve as a reservoir providing an infinite number of dynamical states [1, 2, 3, 4, 5]. These can be interpreted as different behaviors, search a...
Carlos Lourenço
HPDC
2010
IEEE
15 years 28 days ago
Modeling sequence and function similarity between proteins for protein functional annotation
A common task in biological research is to predict function for proteins by comparing sequences between proteins of known and unknown function. This is often done using pair-wise ...
Roger Higdon, Brenton Louie, Eugene Kolker
BMCBI
2010
118views more  BMCBI 2010»
14 years 12 months ago
Detecting lateral gene transfers by statistical reconciliation of phylogenetic forests
Background: To understand the evolutionary role of Lateral Gene Transfer (LGT), accurate methods are needed to identify transferred genes and infer their timing of acquisition. Ph...
Sophie S. Abby, Eric Tannier, Manolo Gouy, Vincent...
BMCBI
2010
136views more  BMCBI 2010»
14 years 12 months ago
The IronChip evaluation package: a package of perl modules for robust analysis of custom microarrays
Background: Gene expression studies greatly contribute to our understanding of complex relationships in gene regulatory networks. However, the complexity of array design, producti...
Yevhen Vainshtein, Mayka Sanchez, Alvis Brazma, Ma...