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BMCBI
2006
112views more  BMCBI 2006»
14 years 9 months ago
Algorithms for incorporating prior topological information in HMMs: application to transmembrane proteins
Background: Hidden Markov Models (HMMs) have been extensively used in computational molecular biology, for modelling protein and nucleic acid sequences. In many applications, such...
Pantelis G. Bagos, Theodore D. Liakopoulos, Stavro...
SIAMDM
1998
89views more  SIAMDM 1998»
14 years 9 months ago
String Noninclusion Optimization Problems
For every string inclusion relation there are two optimization problems: find a longest string included in every string of a given finite language, and find a shortest string in...
Anatoly R. Rubinov, Vadim G. Timkovsky
CLUSTER
2009
IEEE
15 years 4 months ago
Combining I/O operations for multiple array variables in parallel netCDF
—Parallel netCDF (PnetCDF) is a popular library used in many scientific applications to store scientific datasets. It provides high-performance parallel I/O while maintaining ...
Kui Gao, Wei-keng Liao, Alok N. Choudhary, Robert ...
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SIGCOMM
2006
ACM
15 years 3 months ago
Systematic topology analysis and generation using degree correlations
Researchers have proposed a variety of metrics to measure important graph properties, for instance, in social, biological, and computer networks. Values for a particular graph met...
Priya Mahadevan, Dmitri V. Krioukov, Kevin R. Fall...
NIPS
2008
14 years 11 months ago
Grouping Contours Via a Related Image
Contours have been established in the biological and computer vision literature as a compact yet descriptive representation of object shape. While individual contours provide stru...
Praveen Srinivasan, Liming Wang, Jianbo Shi