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» Computational Challenges of Systems Biology
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DNIS
2010
Springer
269views Database» more  DNIS 2010»
15 years 1 months ago
Data Management Challenges in Cloud Computing Infrastructures
Abstract. The challenge of building consistent, available, and scalable data management systems capable of serving petabytes of data for millions of users has confronted the data m...
Divyakant Agrawal, Amr El Abbadi, Shyam Antony, Su...
CCECE
2006
IEEE
15 years 3 months ago
Survey of Biological High Performance Computing: Algorithms, Implementations and Outlook Research
During recent years there has been an explosive growth of biological data coming from genome projects, proteomics, protein structure determination, and the rapid expansion in digi...
Nasreddine Hireche, J. M. Pierre Langlois, Gabriel...
WEA
2005
Springer
176views Algorithms» more  WEA 2005»
15 years 3 months ago
High-Performance Algorithm Engineering for Large-Scale Graph Problems and Computational Biology
Abstract. Many large-scale optimization problems rely on graph theoretic solutions; yet high-performance computing has traditionally focused on regular applications with high degre...
David A. Bader
BMCBI
2007
215views more  BMCBI 2007»
14 years 9 months ago
Learning causal networks from systems biology time course data: an effective model selection procedure for the vector autoregres
Background: Causal networks based on the vector autoregressive (VAR) process are a promising statistical tool for modeling regulatory interactions in a cell. However, learning the...
Rainer Opgen-Rhein, Korbinian Strimmer
TPDS
1998
112views more  TPDS 1998»
14 years 9 months ago
Parallel Computation in Biological Sequence Analysis
—A massive volume of biological sequence data is available in over 36 different databases worldwide, including the sequence data generated by the Human Genome project. These data...
Tieng K. Yap, Ophir Frieder, Robert L. Martino