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CMSB
2006
Springer
15 years 3 months ago
Type Inference in Systems Biology
Type checking and type inference are important concepts and methods of programming languages and software engineering. Type checking is a way to ensure some level of consistency, d...
François Fages, Sylvain Soliman
CMSB
2004
Springer
15 years 5 months ago
Combining State-Based and Scenario-Based Approaches in Modeling Biological Systems
Biological systems have recently been shown to share many of the properties of reactive systems. This observation has led to the idea of using methods devised for the construction ...
Jasmin Fisher, David Harel, E. Jane Albert Hubbard...
BIODATAMINING
2008
119views more  BIODATAMINING 2008»
14 years 12 months ago
A survey of visualization tools for biological network analysis
The analysis and interpretation of relationships between biological molecules, networks and concepts is becoming a major bottleneck in systems biology. Very often the pure amount ...
Georgios A. Pavlopoulos, Anna-Lynn Wegener, Reinha...
HYBRID
2004
Springer
15 years 5 months ago
Dynamic Partitioning of Large Discrete Event Biological Systems for Hybrid Simulation and Analysis
Abstract. Biological systems involving genetic reactions are large discrete event systems, and often contain certain species that occur in small quantities, and others that occur i...
Natasha A. Neogi
GECCO
2008
Springer
158views Optimization» more  GECCO 2008»
15 years 27 days ago
Structure and parameter estimation for cell systems biology models
In this work we present a new methodology for structure and parameter estimation in cell systems biology modelling. Our modelling framework is based on P systems, an unconl comput...
Francisco José Romero-Campero, Hongqing Cao...