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ICPP
2007
IEEE
15 years 4 months ago
Efficient Parallel Algorithm for Optimal Three-Sequences Alignment
Sequence alignment is a fundamental problem in the computational biology. Many alignment methods have been proposed in the literature, such as pair-wise sequence alignment (2SA), ...
Chun-Yuan Lin, Chen Tai Huang, Yeh-Ching Chung, Ch...
PPOPP
2005
ACM
15 years 3 months ago
Exposing disk layout to compiler for reducing energy consumption of parallel disk based systems
Disk subsystem is known to be a major contributor to overall power consumption of high-end parallel systems. Past research proposed several architectural level techniques to reduc...
Seung Woo Son, Guangyu Chen, Mahmut T. Kandemir, A...
DAC
2005
ACM
15 years 10 months ago
Automatic generation of customized discrete fourier transform IPs
This paper presents a parameterized soft core generator for the discrete Fourier transform (DFT). Reusable IPs of digital signal processing (DSP) kernels are important time-saving...
Grace Nordin, Peter A. Milder, James C. Hoe, Marku...
CIKM
2009
Springer
15 years 4 months ago
Learning to rank graphs for online similar graph search
Many applications in structure matching require the ability to search for graphs that are similar to a query graph, i.e., similarity graph queries. Prior works, especially in chem...
Bingjun Sun, Prasenjit Mitra, C. Lee Giles
ASPLOS
2006
ACM
15 years 1 months ago
Accurate and efficient regression modeling for microarchitectural performance and power prediction
We propose regression modeling as an efficient approach for accurately predicting performance and power for various applications executing on any microprocessor configuration in a...
Benjamin C. Lee, David M. Brooks