We give a description of a Petri net-based framework for modelling and analysing biochemical pathways, which unifies the qualitative, stochastic and continuous paradigms. Each per...
We present a numerical approximation technique for the analysis of continuous-time Markov chains that describe networks of biochemical reactions and play an important role in the ...
Thomas A. Henzinger, Maria Mateescu, Linar Mikeev,...
Many natural language processing approaches at various complexity levels have been reported for extracting biochemical interactions from MEDLINE. While some algorithms using simpl...
Jing Ding, Daniel Berleant, Jun Xu, Andy W. Fulmer
Biochemical pathways such as metabolic, regulatory or signal tranduction pathways can be viewed as interconnected processes forming an intricate network of functional and physical...
Yves Deville, David Gilbert, Jacques van Helden, S...
Quantitative modeling plays a key role in the natural sciences, and systems that address the task of inductive process modeling can assist researchers in explaining their data. In...