In a recent paper (Preparata et al., 1999) we introduced a novel probing scheme for DNA sequencing by hybridization (SBH). The new gapped-probe scheme combines natural and univers...
During the last half-decade, a number of research efforts have centered around developing software for generating automatically tuned matrix multiplication kernels. These include ...
John A. Gunnels, Fred G. Gustavson, Greg Henry, Ro...
Short vector SIMD instructions on recent microprocessors, such as SSE on Pentium III and 4, speed up code but are a major challenge to software developers. We present a compiler t...
We investigate fully parallel Newton-Krylov-Schwarz (NKS) algorithms for solving the large sparse nonlinear systems of equations arising from the finite element discretization of ...
Biological networks are commonly used to model molecular activity within the cell. Recent experimental studies have shown that the detection of conserved subnetworks across several...