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» Computer algebra in systems biology
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DCOSS
2006
Springer
15 years 1 months ago
The Virtual Pheromone Communication Primitive
We propose a generic communication primitive designed for sensor networks. Our primitive hides details of network communication while retaining sufficient programmer control over t...
Leo Szumel, John D. Owens
BMCBI
2007
103views more  BMCBI 2007»
14 years 10 months ago
Dynamic simulation of regulatory networks using SQUAD
Background: The ambition of most molecular biologists is the understanding of the intricate network of molecular interactions that control biological systems. As scientists uncove...
Alessandro Di Cara, Abhishek Garg, Giovanni De Mic...
ICPP
2006
IEEE
15 years 3 months ago
Scalable Time-Parallelization of Molecular Dynamics Simulations in Nano Mechanics
— Molecular Dynamics (MD) is an important atomistic simulation technique, with widespread use in computational chemistry, biology, and materials. An important limitation of MD is...
Yanan Yu, Ashok Srinivasan, Namas Chandra
MOBIHOC
2003
ACM
15 years 9 months ago
The shared wireless infostation model: a new ad hoc networking paradigm (or where there is a whale, there is a way)
In wireless ad hoc networks, capacity can be traded for delay. This tradeoff has been the subject of a number of studies, mainly concentrating on the two extremes: either minimizi...
Tara Small, Zygmunt J. Haas
BMCBI
2007
146views more  BMCBI 2007»
14 years 10 months ago
Spatial location and its relevance for terminological inferences in bio-ontologies
Background: An adequate and expressive ontological representation of biological organisms and their parts requires formal reasoning mechanisms for their relations of physical aggr...
Stefan Schulz, Kornél G. Markó, Udo ...