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ASPLOS
2011
ACM
14 years 7 months ago
Sponge: portable stream programming on graphics engines
Graphics processing units (GPUs) provide a low cost platform for accelerating high performance computations. The introduction of new programming languages, such as CUDA and OpenCL...
Amir Hormati, Mehrzad Samadi, Mark Woh, Trevor N. ...
ASPLOS
2011
ACM
14 years 7 months ago
MemScale: active low-power modes for main memory
Main memory is responsible for a large and increasing fraction of the energy consumed by servers. Prior work has focused on exploiting DRAM low-power states to conserve energy. Ho...
Qingyuan Deng, David Meisner, Luiz E. Ramos, Thoma...
BMCBI
2011
14 years 7 months ago
CLOTU: An online pipeline for processing and clustering of 454 amplicon reads into OTUs followed by taxonomic annotation
Background: The implementation of high throughput sequencing for exploring biodiversity poses high demands on bioinformatics applications for automated data processing. Here we in...
Surendra Kumar, Tor Carlsen, Bjørn-Helge Me...
BMCBI
2011
14 years 7 months ago
The Proteogenomic Mapping Tool
Background: High-throughput mass spectrometry (MS) proteomics data is increasingly being used to complement traditional structural genome annotation methods. To keep pace with the...
William S. Sanders, Nan Wang, Susan M. Bridges, Br...
CC
2011
Springer
270views System Software» more  CC 2011»
14 years 7 months ago
Subregion Analysis and Bounds Check Elimination for High Level Arrays
For decades, the design and implementation of arrays in programming languages has reflected a natural tension between productivity and performance. Recently introduced HPCS langua...
Mackale Joyner, Zoran Budimlic, Vivek Sarkar
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