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BMCBI
2006
122views more  BMCBI 2006»
15 years 4 months ago
BioMoby extensions to the Taverna workflow management and enactment software
Background: As biology becomes an increasingly computational science, it is critical that we develop software tools that support not only bioinformaticians, but also bench biologi...
Edward A. Kawas, Martin Senger, Mark D. Wilkinson
BMCBI
2007
182views more  BMCBI 2007»
15 years 4 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2007
116views more  BMCBI 2007»
15 years 4 months ago
MED: a new non-supervised gene prediction algorithm for bacterial and archaeal genomes
Background: Despite a remarkable success in the computational prediction of genes in Bacteria and Archaea, a lack of comprehensive understanding of prokaryotic gene structures pre...
Huaiqiu Zhu, Gang-Qing Hu, Yi-Fan Yang, Jin Wang, ...
CORR
2007
Springer
122views Education» more  CORR 2007»
15 years 4 months ago
How to Complete a Doubling Metric
In recent years, considerable advances have been made in the study of properties of metric spaces in terms of their doubling dimension. This line of research has not only enhanced...
Anupam Gupta, Kunal Talwar
BMCBI
2005
98views more  BMCBI 2005»
15 years 4 months ago
Iterative approach to model identification of biological networks
Background: Recent advances in molecular biology techniques provide an opportunity for developing detailed mathematical models of biological processes. An iterative scheme is intr...
Kapil G. Gadkar, Rudiyanto Gunawan, Francis J. Doy...