Reliable DNA computing requires a large pool of oligonucleotides that do not produce cross-hybridize. In this paper, we present a transformed algorithm to calculate the maximum wei...
Qinru Qiu, Prakash Mukre, Morgan Bishop, Daniel J....
Motivated by the poor performance (linear complexity) of the EM algorithm in clustering large data sets, and inspired by the successful accelerated versions of related algorithms l...
In this paper, we present four scheduling algorithms that provide flexible utilization of fine-grain DSP accelerators with low run-time overhead. Methods that have originally been...
Jani Boutellier, Shuvra S. Bhattacharyya, Olli Sil...
We propose a new parallelization scheme for the hmmsearch function of the HMMER software, in order to target FPGA technology. hmmsearch is a very compute intensive software for bio...
This paper exploits the spatial representation of state space problem graphs to preprocess and enhance heuristic search engines. It combines classical AI exploration with computati...