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131
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BMCBI
2004
123views more  BMCBI 2004»
15 years 3 months ago
A two-way interface between limited Systems Biology Markup Language and R
Background: Systems Biology Markup Language (SBML) is gaining broad usage as a standard for representing dynamical systems as data structures. The open source statistical programm...
Tomas Radivoyevitch
153
Voted
BMCBI
2004
112views more  BMCBI 2004»
15 years 3 months ago
A double classification tree search algorithm for index SNP selection
Background: In population-based studies, it is generally recognized that single nucleotide polymorphism (SNP) markers are not independent. Rather, they are carried by haplotypes, ...
Peisen Zhang, Huitao Sheng, Ryuhei Uehara
150
Voted
CCR
2004
105views more  CCR 2004»
15 years 3 months ago
The measurement manifesto
Useful measurement data is badly needed to help monitor and control large networks. Current approaches to solving measurement problems often assume minimal support from routers and...
George Varghese, Cristian Estan
132
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CORR
2004
Springer
103views Education» more  CORR 2004»
15 years 3 months ago
Online convex optimization in the bandit setting: gradient descent without a gradient
We study a general online convex optimization problem. We have a convex set S and an unknown sequence of cost functions c1, c2, . . . , and in each period, we choose a feasible po...
Abraham Flaxman, Adam Tauman Kalai, H. Brendan McM...
177
Voted
BMCBI
2002
108views more  BMCBI 2002»
15 years 3 months ago
A memory-efficient dynamic programming algorithm for optimal alignment of a sequence to an RNA secondary structure
Background: Covariance models (CMs) are probabilistic models of RNA secondary structure, analogous to profile hidden Markov models of linear sequence. The dynamic programming algo...
Sean R. Eddy
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