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160
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BMCBI
2007
144views more  BMCBI 2007»
15 years 3 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...
120
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IFL
2004
Springer
131views Formal Methods» more  IFL 2004»
15 years 9 months ago
Exploiting Single-Assignment Properties to Optimize Message-Passing Programs by Code Transformations
The message-passing paradigm is now widely accepted and used mainly for inter-process communication in distributed memory parallel systems. However, one of its disadvantages is the...
Alfredo Cristóbal-Salas, Andrey Chernykh, E...
130
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AUTOMATICA
2008
167views more  AUTOMATICA 2008»
15 years 3 months ago
Stability and robustness analysis of nonlinear systems via contraction metrics and SOS programming
A wide variety of stability and performance questions about linear dynamical systems can be reformulated as convex optimization problems involving linear matrix inequalities (LMIs...
Erin M. Aylward, Pablo A. Parrilo, Jean-Jacques E....
158
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DKE
2010
167views more  DKE 2010»
15 years 3 months ago
The consistency extractor system: Answer set programs for consistent query answering in databases
We describe the Consistency Extractor System (ConsEx) that computes consistent answers to Datalog queries with negation posed to relational databases that may be inconsistent with...
Mónica Caniupán Marileo, Leopoldo E....
115
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KBSE
2010
IEEE
15 years 2 months ago
A program differencing algorithm for verilog HDL
During code review tasks, comparing two versions of a hardware design description using existing program differencing tools such as diff is inherently limited because existing p...
Adam Duley, Chris Spandikow, Miryung Kim