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» Computing persistent homology
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BMCBI
2006
109views more  BMCBI 2006»
14 years 9 months ago
A computational approach to discovering the functions of bacterial phytochromes by analysis of homolog distributions
Background: Phytochromes are photoreceptors, discovered in plants, that control a wide variety of developmental processes. They have also been found in bacteria and fungi, but for...
Tilman Lamparter
GBRPR
2007
Springer
15 years 3 months ago
Extending the Notion of AT-Model for Integer Homology Computation
Rocío González-Díaz, Mar&iacu...
ISAAC
2009
Springer
93views Algorithms» more  ISAAC 2009»
15 years 4 months ago
Computing Multidimensional Persistence
Abstract. The theory of multidimensional persistence captures the topology of a multifiltration – a multiparameter family of increasing spaces. Multifiltrations arise naturally...
Gunnar Carlsson, Gurjeet Singh, Afra Zomorodian
BMCBI
2006
103views more  BMCBI 2006»
14 years 9 months ago
Statistical inference of chromosomal homology based on gene colinearity and applications to Arabidopsis and rice
Background: The identification of chromosomal homology will shed light on such mysteries of genome evolution as DNA duplication, rearrangement and loss. Several approaches have be...
Xiyin Wang, Xiaoli Shi, Zhe Li, Qihui Zhu, Lei Kon...