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» Computing persistent homology
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SAC
2006
ACM
15 years 3 months ago
Protein classification using transductive learning on phylogenetic profiles
Phylogenetic profiles of proteins − strings of ones and zeros encoding respectively the presence and absence of proteins in a group of genomes − have recently been used to iden...
Roger A. Craig, Li Liao
ICCV
2003
IEEE
15 years 3 months ago
Plane-based Calibration Algorithm for Multi-camera Systems via Factorization of Homography Matrices
A new calibration algorithm for multi-camera systems using a planar reference pattern is proposed. The algorithm is an extension of Sturm-Maybank-Zhang style plane-based calibrati...
Toshio Ueshiba, Fumiaki Tomita
ICPP
2003
IEEE
15 years 3 months ago
FastLSA: A Fast, Linear-Space, Parallel and Sequential Algorithm for Sequence Alignment
Pairwise sequence alignment is a fundamental operation for homology search in bioinformatics. For two DNA or protein sequences of length ¢ and £ , full-matrix (FM), dynamic prog...
Adrian Driga, Paul Lu, Jonathan Schaeffer, Duane S...
PPSN
1994
Springer
15 years 1 months ago
A Representation Scheme To Perform Program Induction in a Canonical Genetic Algorithm
This paper studies Genetic Programming (GP) and its relation to the Genetic Algorithm (GA). GP uses a GA approach to breed successive populations of programs, represented in the ch...
Mark Wineberg, Franz Oppacher
ISMB
2007
15 years 4 days ago
Automatic genome-wide reconstruction of phylogenetic gene trees
Gene duplication and divergence is a major evolutionary force. Despite the growing number of fully sequenced genomes, methods for investigating these events on a genome-wide scale...
Ilan Wapinski, Avi Pfeffer, Nir Friedman, Aviv Reg...