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ECCC
2008
122views more  ECCC 2008»
15 years 5 months ago
Every Minor-Closed Property of Sparse Graphs is Testable
Testing a property P of graphs in the bounded degree model is the following computational problem: given a graph G of bounded degree d we should distinguish (with probability 0.9,...
Itai Benjamini, Oded Schramm, Asaf Shapira
ALGORITHMICA
2006
94views more  ALGORITHMICA 2006»
15 years 5 months ago
Efficient Algorithms for k Maximum Sums
We study the problem of computing the k maximum sum subsequences. Given a sequence of real numbers x1, x2, . . . , xn and an integer parameter k, 1 k 1 2 n(n - 1), the problem in...
Fredrik Bengtsson, Jingsen Chen
BMCBI
2006
164views more  BMCBI 2006»
15 years 5 months ago
BIOZON: a system for unification, management and analysis of heterogeneous biological data
Integration of heterogeneous data types is a challenging problem, especially in biology, where the number of databases and data types increase rapidly. Amongst the problems that o...
Aaron Birkland, Golan Yona
BMCBI
2006
85views more  BMCBI 2006»
15 years 5 months ago
SVM-based prediction of caspase substrate cleavage sites
Background: Caspases belong to a class of cysteine proteases which function as critical effectors in apoptosis and inflammation by cleaving substrates immediately after unique sit...
Lawrence J. K. Wee, Tin Wee Tan, Shoba Ranganathan
BMCBI
2006
75views more  BMCBI 2006»
15 years 5 months ago
Improving the specificity of high-throughput ortholog prediction
Background: Orthologs (genes that have diverged after a speciation event) tend to have similar function, and so their prediction has become an important component of comparative g...
Debra L. Fulton, Yvonne Y. Li, Matthew R. Laird, B...
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