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140
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CIKM
2009
Springer
15 years 10 months ago
Linear predictive coding representation of correlated mutation for protein sequence alignment
Background: Although both conservation and correlated mutation (CM) are important information reflecting the different sorts of context in multiple sequence alignment, most of ali...
Chan-seok Jeong, Dongsup Kim
131
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SAC
2010
ACM
15 years 3 months ago
FANGS: high speed sequence mapping for next generation sequencers
Next Generation Sequencing machines are generating millions of short DNA sequences (reads) everyday. There is a need for efficient algorithms to map these sequences to the referen...
Sanchit Misra, Ramanathan Narayanan, Simon Lin, Al...
GFKL
2005
Springer
95views Data Mining» more  GFKL 2005»
15 years 9 months ago
An Indicator for the Number of Clusters: Using a Linear Map to Simplex Structure
Abstract. The problem of clustering data can be formulated as a graph partitioning problem. In this setting, spectral methods for obtaining optimal solutions have received a lot of...
Marcus Weber, Wasinee Rungsarityotin, Alexander Sc...
153
Voted
IWCMC
2010
ACM
15 years 8 months ago
Group detection in mobility traces
—Analysis and modeling of wireless networks greatly depend on understanding the structure of underlying mobile nodes. In this paper we present two clustering algorithms to determ...
Yung-Chih Chen, Elisha J. Rosensweig, Jim Kurose, ...
122
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ICMLA
2008
15 years 5 months ago
Farthest Centroids Divisive Clustering
A method is presented to partition a given set of data entries embedded in Euclidean space by recursively bisecting clusters into smaller ones. The initial set is subdivided into ...
Haw-ren Fang, Yousef Saad