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» Computing with Evolving Proteins

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NAR
2011

183views Computer Vision» more NAR 2011»

RegPhos: a system to explore the protein kinase-substrate phosphorylation network in humans

14 years 27 days ago

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Tzong-Yi Lee, Justin Bo-Kai Hsu, Wen-Chi Chang, Hs...

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NAR
2011

158views Computer Vision» more NAR 2011»

CPLA 1.0: an integrated database of protein lysine acetylation

14 years 27 days ago

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Zexian Liu, Jun Cao, Xinjiao Gao, Yanhong Zhou, Lo...

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APPROX
2004
Springer

116views Algorithms» more APPROX 2004»

Randomized Approximation Algorithms for Set Multicover Problems with Applications to Reverse Engineering of Protein and Gene Net

15 years 3 months ago

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In this paper we investigate the computational complexity of a combinatorial problem that arises in the reverse engineering of protein and gene networks. Our contributions are as ...

Piotr Berman, Bhaskar DasGupta, Eduardo D. Sontag

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RECOMB
2006
Springer

151views Computational Biology» more RECOMB 2006»

Markov Additive Chains and Applications to Fragment Statistics for Peptide Mass Fingerprinting

15 years 10 months ago

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Abstract. Peptide mass fingerprinting is a technique to identify a protein from its fragment masses obtained by mass spectrometry after enzymatic digestion. Recently, much attentio...

Hans-Michael Kaltenbach, Sebastian Böcker, Sv...

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NAR
2002

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The PROSITE database, its status in 2002

14 years 9 months ago