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    ISMB
    1996
    110views Computational Biology» more  ISMB 1996»
    The Megaprior Heuristic for Discovering Protein Sequence Patterns
    14 years 11 months ago
    The Megaprior Heuristic for Discovering Protein Sequence Patterns
    Download  www.aaai.org
    Several computeralgorithms for discovering patterns in groups of protein sequences are in use that are basedon fitting the parametersof a statistical model to a group of related s...
    Timothy L. Bailey, Michael Gribskov
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    RECOMB
    2007
    Springer
    119views Computational Biology» more  RECOMB 2007»
    Free Energy Estimates of All-Atom Protein Structures Using Generalized Belief Propagation
    15 years 10 months ago
    Free Energy Estimates of All-Atom Protein Structures Using Generalized Belief Propagation
    Download  www.cs.cmu.edu
    We present a technique for approximating the free energy of protein structures using Generalized Belief Propagation (GBP). The accuracy and utility of these estimates are then demo...
    Hetunandan Kamisetty, Eric P. Xing, Christopher Ja...
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    RECOMB
    2007
    Springer
    158views Computational Biology» more  RECOMB 2007»
    A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements
    15 years 10 months ago
    A Bayesian Model That Links Microarray mRNA Measurements to Mass Spectrometry Protein Measurements
    Download  www.psi.toronto.edu
    Abstract. An important problem in biology is to understand correspondences between mRNA microarray levels and mass spectrometry peptide counts. Recently, a compendium of mRNA expre...
    Anitha Kannan, Andrew Emili, Brendan J. Frey
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    BMCBI
    2006
    111views more  BMCBI 2006»
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
    14 years 10 months ago
    PepDist: A New Framework for Protein-Peptide Binding Prediction based on Learning Peptide Distance Functions
    Download  www.biomedcentral.com
    Background: Many different aspects of cellular signalling, trafficking and targeting mechanisms are mediated by interactions between proteins and peptides. Representative examples...
    Tomer Hertz, Chen Yanover
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    CSB
    2003
    IEEE
    66views Bioinformatics» more  CSB 2003»
    An Exact Algorithm For Determining Protein Backbone Structure From NH Residual Dipolar Couplings
    15 years 3 months ago
    An Exact Algorithm For Determining Protein Backbone Structure From NH Residual Dipolar Couplings
    Download  www.cs.toronto.edu
    We have developed a novel algorithm for protein backbone structure determination using global orientational restraints on internuclear bond vectors derived from residual dipolar c...
    Lincong Wang, Ramgopal R. Mettu, Ryan H. Lilien, B...
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