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» Computing with Evolving Proteins
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GECCO
2008
Springer
104views Optimization» more  GECCO 2008»
14 years 12 months ago
Protein-protein functional association prediction using genetic programming
Determining if a group of proteins are functionally associated among themselves is an open problem in molecular biology. Within our long term goal of applying Genetic Programming ...
Beatriz García, Ricardo Aler, Agapito Ledez...
ENTCS
2010
127views more  ENTCS 2010»
14 years 11 months ago
Combining Model Reductions
Molecular biological models usually suffer from a large combinatorial explosion. Indeed, proteins form complexes and modify each others, which leads to the formation of a huge num...
Ferdinanda Camporesi, Jérôme Feret, H...
CANDC
2006
ACM
14 years 11 months ago
Domain boundary prediction based on profile domain linker propensity index
Successful prediction of protein domain boundaries provides valuable information not only for the computational structure prediction of multidomain proteins but also for the exper...
Qiwen Dong, Xiaolong Wang, Lei Lin, Zhiming Xu
73
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JCC
2011
105views more  JCC 2011»
14 years 5 months ago
Wordom: A user-friendly program for the analysis of molecular structures, trajectories, and free energy surfaces
Abstract: Wordom is a versatile, user-friendly, and efficient program for manipulation and analysis of molecular structures and dynamics. The following new analysis modules have b...
Michele Seeber, Angelo Felline, Francesco Raimondi...
PRL
2011
14 years 1 months ago
Structural matching of 2D electrophoresis gels using deformed graphs
2D electrophoresis is a well known method for protein separation which is extremely useful in the field of proteomics. Each spot in the image represents a protein accumulation an...
Alexandre Noma, Alvaro Pardo, Roberto Marcondes Ce...