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» Computing with Evolving Proteins
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NAR
2000
93views more  NAR 2000»
14 years 10 months ago
Olfactory Receptor Database: a sensory chemoreceptor resource
The Olfactory Receptor Database (ORDB) is a WWWaccessible database that has been expanded from an olfactory receptor resource to a chemoreceptor resource. It stores data on six cl...
Emmanouil Skoufos, Luis N. Marenco, Prakash M. Nad...
NAR
2002
132views more  NAR 2002»
14 years 9 months ago
euGenes: a eukaryote genome information system
euGenes is a genome information system and database that provides a common summary of eukaryote genes and genomes, at web site http://iubio.bio.indiana.edu/eugenes/. Seven popular...
Donald G. Gilbert
JCC
2008
99views more  JCC 2008»
14 years 8 months ago
Assessment of programs for ligand binding affinity prediction
: The prediction of the binding free energy between a ligand and a protein is an important component in the virtual screening and lead optimization of ligands for drug discovery. T...
Ryangguk Kim, Jeffrey Skolnick
BIOCOMP
2010
14 years 8 months ago
A Model Reduction Technique for Stochastic Biochemical Kinetics
Abstract-- Modeling the intermolecular reactions in a single cell is a critical problem in computational biology. Biochemical reaction systems often involve species in both low and...
Silvana Ilie, Ekaterina Kudashkina
ICASSP
2011
IEEE
14 years 1 months ago
Uncover cooperative gene regulations by microRNAs and transcription factors in glioblastoma using a nonnegative hybrid factor mo
—Transcriptional regulation by transcription factors (TFs) and microRNAs controls when and how much RNA is created. Due to technical limitations, the protein level expressions of...
Jia Meng, Hung-I Harry Chen, Jianqiu Zhang, Yidong...