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» Computing with Evolving Proteins
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ISMB
2004
15 years 14 days ago
Predicting protein folding pathways
Keywords PRIMARY: protein structure comparison SECONDARY: protein structure prediction OTHER: protein folding pathway
Mohammed Javeed Zaki, Vinay Nadimpally, Deb Bardha...
BMCBI
2010
177views more  BMCBI 2010»
14 years 11 months ago
Clustering of protein families into functional subtypes using Relative Complexity Measure with reduced amino acid alphabets
Background: Phylogenetic analysis can be used to divide a protein family into subfamilies in the absence of experimental information. Most phylogenetic analysis methods utilize mu...
Aydin Albayrak, Hasan H. Otu, Ugur O. Sezerman
ECAL
2003
Springer
15 years 4 months ago
Evolving Fractal Gene Regulatory Networks for Robot Control
Fractal proteins are a new evolvable method of mapping genotype to phenotype through a developmental process, where genes are expressed into proteins comprised of subsets of the Ma...
Peter J. Bentley
ICES
2003
Springer
114views Hardware» more  ICES 2003»
15 years 4 months ago
Evolving Fractal Proteins
The fractal protein is a new concept for improving evolvability, scalability, exploitability and providing a rich medium for evolution. Here the idea of fractal proteins is introdu...
Peter J. Bentley
BMCBI
2007
144views more  BMCBI 2007»
14 years 11 months ago
Motif kernel generated by genetic programming improves remote homology and fold detection
Background: Protein remote homology detection is a central problem in computational biology. Most recent methods train support vector machines to discriminate between related and ...
Tony Håndstad, Arne J. H. Hestnes, Pål...