Sciweavers

2666 search results - page 4 / 534
» Computing with Evolving Proteins
Sort
View
92
Voted
BMCBI
2007
117views more  BMCBI 2007»
14 years 9 months ago
Supervised multivariate analysis of sequence groups to identify specificity determining residues
Background: Proteins that evolve from a common ancestor can change functionality over time, and it is important to be able identify residues that cause this change. In this paper ...
Iain M. Wallace, Desmond G. Higgins
ALMOB
2007
170views more  ALMOB 2007»
14 years 9 months ago
A spatio-temporal mining approach towards summarizing and analyzing protein folding trajectories
Understanding the protein folding mechanism remains a grand challenge in structural biology. In the past several years, computational theories in molecular dynamics have been empl...
Hui Yang, Srinivasan Parthasarathy, Duygu Ucar
RECOMB
2009
Springer
15 years 10 months ago
An Online Approach for Mining Collective Behaviors from Molecular Dynamics Simulations
Collective behavior involving distally separate regions in a protein is known to widely affect its function. In this paper, we present an online approach to study and characterize ...
Arvind Ramanathan, Pratul K. Agarwal, Maria Kurnik...
BIOCOMP
2006
14 years 11 months ago
Study on Properties of Protein Folding Conformation Network
- Protein folding conformations take the form of networks, sets of conformations (vertices) joined together in pairs by links or edges. Protein folding conformation network is a co...
Nengchao Wang, Zhongjun Wang
92
Voted
BIBE
2003
IEEE
133views Bioinformatics» more  BIBE 2003»
15 years 2 months ago
A Computational Pipeline for Protein Structure Prediction and Analysis at Genome Scale
The tertiary (3D) structure of a protein contains the essential information for understanding the biological function of the protein at the molecular and cellular levels. Traditio...
Manesh J. Shah, Sergei Passovets, Dongsup Kim, Kyl...