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» Computing with Evolving Proteins
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ADC
2006
Springer
158views Database» more  ADC 2006»
15 years 3 months ago
Dimensionality reduction in patch-signature based protein structure matching
Searching bio-chemical structures is becoming an important application domain of information retrieval. This paper introduces a protein structure matching problem and formulates i...
Zi Huang, Xiaofang Zhou, Dawei Song, Peter Bruza
CSB
2002
IEEE
109views Bioinformatics» more  CSB 2002»
15 years 2 months ago
Towards Automatic Clustering of Protein Sequences
Analyzing protein sequence data becomes increasingly important recently. Most previous work on this area has mainly focused on building classification models. In this paper, we i...
Jiong Yang, Wei Wang 0010
SDM
2010
SIAM
192views Data Mining» more  SDM 2010»
14 years 11 months ago
Fast and Accurate Gene Prediction by Decision Tree Classification
Gene prediction is one of the most challenging tasks in genome analysis, for which many tools have been developed and are still evolving. In this paper, we present a novel gene pr...
Rong She, Jeffrey Shih-Chieh Chu, Ke Wang, Nanshen...
CIBCB
2006
IEEE
15 years 3 months ago
A Swarm Intelligence Based Algorithm for Proteomic Pattern Detection of Ovarian Cancer
- The advanced protein profiling technologies can simultaneously resolve and analyze multiple proteins. Evaluating multiple proteins will be essential to establish signature proteo...
Yan Meng
CSB
2003
IEEE
176views Bioinformatics» more  CSB 2003»
15 years 3 months ago
3D Structural Homology Detection via Unassigned Residual Dipolar Couplings
Recognition of a protein’s fold provides valuable information about its function. While many sequence-based homology prediction methods exist, an important challenge remains: tw...
Christopher James Langmead, Bruce Randall Donald