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168
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BMCBI
2006
94views more  BMCBI 2006»
15 years 3 months ago
Genepi: a blackboard framework for genome annotation
Background: Genome annotation can be viewed as an incremental, cooperative, data-driven, knowledge-based process that involves multiple methods to predict gene locations and struc...
Stéphane Descorps-Declère, Danielle ...
139
Voted
COMCOM
2006
147views more  COMCOM 2006»
15 years 3 months ago
Coverage-adaptive random sensor scheduling for application-aware data gathering in wireless sensor networks
Due to the application-specific nature of wireless sensor networks, application-aware algorithm and protocol design paradigms are highly required in order to optimize the overall ...
Wook Choi, Sajal K. Das
BMCBI
2007
182views more  BMCBI 2007»
15 years 3 months ago
Identifying regulatory targets of cell cycle transcription factors using gene expression and ChIP-chip data
Background: ChIP-chip data, which indicate binding of transcription factors (TFs) to DNA regions in vivo, are widely used to reconstruct transcriptional regulatory networks. Howev...
Wei-Sheng Wu, Wen-Hsiung Li, Bor-Sen Chen
BMCBI
2007
137views more  BMCBI 2007»
15 years 3 months ago
PlnTFDB: an integrative plant transcription factor database
Background: Transcription factors (TFs) are key regulatory proteins that enhance or repress the transcriptional rate of their target genes by binding to specific promoter regions ...
Diego Mauricio Riaño-Pachón, Sloboda...
136
Voted
BMCBI
2007
148views more  BMCBI 2007»
15 years 3 months ago
WeederH: an algorithm for finding conserved regulatory motifs and regions in homologous sequences
Background: This work addresses the problem of detecting conserved transcription factor binding sites and in general regulatory regions through the analysis of sequences from homo...
Giulio Pavesi, Federico Zambelli, Graziano Pesole
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