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» Conditional Functional Dependencies for Data Cleaning
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BMCBI
2007
198views more  BMCBI 2007»
14 years 9 months ago
Correlation analysis reveals the emergence of coherence in the gene expression dynamics following system perturbation
Time course gene expression experiments are a popular means to infer co-expression. Many methods have been proposed to cluster genes or to build networks based on similarity measu...
Nicola Neretti, Daniel Remondini, Marc Tatar, John...
CVPR
2008
IEEE
15 years 11 months ago
Dimensionality reduction using covariance operator inverse regression
We consider the task of dimensionality reduction for regression (DRR) whose goal is to find a low dimensional representation of input covariates, while preserving the statistical ...
Minyoung Kim, Vladimir Pavlovic
BMCBI
2010
164views more  BMCBI 2010»
14 years 9 months ago
Investigating the validity of current network analysis on static conglomerate networks by protein network stratification
Background: A molecular network perspective forms the foundation of systems biology. A common practice in analyzing protein-protein interaction (PPI) networks is to perform networ...
Minlu Zhang, Long J. Lu
BIOINFORMATICS
2011
14 years 1 months ago
A method for probing the mutational landscape of amyloid structure
Motivation: Proteins of all kinds can self-assemble into highly ordered β-sheet aggregates known as amyloid fibrils, important both biologically and clinically. However, the spe...
Charles W. O'Donnell, Jérôme Waldisp&...
CORR
2008
Springer
121views Education» more  CORR 2008»
14 years 9 months ago
Rate-Distortion via Markov Chain Monte Carlo
We propose an approach to lossy source coding, utilizing ideas from Gibbs sampling, simulated annealing, and Markov Chain Monte Carlo (MCMC). The idea is to sample a reconstructio...
Shirin Jalali, Tsachy Weissman