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EUROGP
2005
Springer
15 years 5 months ago
Evolving L-Systems to Capture Protein Structure Native Conformations
Abstract. A protein is a linear chain of amino acids that folds into a unique functional structure, called its native state. In this state, proteins show repeated substructures lik...
Gabi Escuela, Gabriela Ochoa, Natalio Krasnogor
BMCBI
2007
99views more  BMCBI 2007»
14 years 12 months ago
Identifying allosteric fluctuation transitions between different protein conformational states as applied to Cyclin Dependent Ki
Background: The mechanisms underlying protein function and associated conformational change are dominated by a series of local entropy fluctuations affecting the global structure ...
Jenny Gu, Philip E. Bourne
BMCBI
2010
133views more  BMCBI 2010»
14 years 12 months ago
Integrated prediction of one-dimensional structural features and their relationships with conformational flexibility in helical
Background: Many structural properties such as solvent accessibility, dihedral angles and helix-helix contacts can be assigned to each residue in a membrane protein. Independent s...
Shandar Ahmad, Yumlembam Hemjit Singh, Yogesh Paud...
OOPSLA
2009
Springer
15 years 6 months ago
Static extraction and conformance analysis of hierarchical runtime architectural structure using annotations
An object diagram makes explicit the object structures that are only implicit in a class diagram. An object diagram may be missing and must extracted from the code. Alternatively,...
Marwan Abi-Antoun, Jonathan Aldrich
JLP
2006
108views more  JLP 2006»
14 years 11 months ago
On testing UML statecharts
We present a formal framework for notions related to testing and model based test generation for a behavioural subset of UML Statecharts (UMLSCs). This framework builds, on one ha...
Mieke Massink, Diego Latella, Stefania Gnesi