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ALMOB
2008
131views more  ALMOB 2008»
15 years 3 months ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
ALGORITHMICA
2007
132views more  ALGORITHMICA 2007»
15 years 3 months ago
On the Feasibility of Time Estimation under Isolation Conditions in Wireless Sensor Networks
We study the problem of providing a sensor with an accurate estimate of the time, from a novel perspective which is complementary to the well-studied clock synchronization problem....
Daniela Tulone
BIOINFORMATICS
2010
116views more  BIOINFORMATICS 2010»
15 years 3 months ago
A principal skeleton algorithm for standardizing confocal images of fruit fly nervous systems
Motivation: The fruit fly (Drosophila melanogaster) is a commonly used model organism in biology. We are currently building a 3D digital atlas of the fruit fly larval nervous syst...
Lei Qu, Hanchuan Peng
BMCBI
2010
139views more  BMCBI 2010»
15 years 3 months ago
A highly efficient multi-core algorithm for clustering extremely large datasets
Background: In recent years, the demand for computational power in computational biology has increased due to rapidly growing data sets from microarray and other high-throughput t...
Johann M. Kraus, Hans A. Kestler
BMCBI
2007
102views more  BMCBI 2007»
15 years 3 months ago
FlexOracle: predicting flexible hinges by identification of stable domains
Background: Protein motions play an essential role in catalysis and protein-ligand interactions, but are difficult to observe directly. A substantial fraction of protein motions i...
Samuel Flores, Mark Gerstein
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