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NAR
2011
158views Computer Vision» more  NAR 2011»
14 years 2 months ago
T1DBase: update 2011, organization and presentation of large-scale data sets for type 1 diabetes research
T1DBase (http://www.t1dbase.org) is web platform, which supports the type 1 diabetes (T1D) community. It integrates genetic, genomic and expression data relevant to T1D research a...
Oliver S. Burren, Ellen C. Adlem, Premanand Achuth...
BMCBI
2006
144views more  BMCBI 2006»
14 years 12 months ago
More robust detection of motifs in coexpressed genes by using phylogenetic information
Background: Several motif detection algorithms have been developed to discover overrepresented motifs in sets of coexpressed genes. However, in a noisy gene list, the number of ge...
Pieter Monsieurs, Gert Thijs, Abeer A. Fadda, Sigr...
BMCBI
2007
122views more  BMCBI 2007»
14 years 12 months ago
Dissecting complex transcriptional responses using pathway-level scores based on prior information
Background: The genomewide pattern of changes in mRNA expression measured using DNA microarrays is typically a complex superposition of the response of multiple regulatory pathway...
Harmen J. Bussemaker, Lucas D. Ward, André ...
WOB
2008
128views Bioinformatics» more  WOB 2008»
15 years 1 months ago
Tests for Gene Clusters Satisfying the Generalized Adjacency Criterion
Abstract. We study a parametrized definition of gene clusters that permits control over the trade-off between increasing gene content versus conserving gene order within a cluster....
Ximing Xu, David Sankoff
JUCS
2007
118views more  JUCS 2007»
14 years 11 months ago
A Model of Immune Gene Expression Programming for Rule Mining
: Rule mining is an important issue in data mining. To address it, a novel Immune Gene Expression Programming (IGEP) model was proposed. Concepts of rule, gene, immune cell, and an...
Tao Zeng, Changjie Tang, Yong Xiang, Peng Chen, Yi...