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RECOMB
2004
Springer
16 years 6 months ago
Mining protein family specific residue packing patterns from protein structure graphs
Finding recurring residue packing patterns, or spatial motifs, that characterize protein structural families is an important problem in bioinformatics. To this end, we apply a nov...
Jun Huan, Wei Wang 0010, Deepak Bandyopadhyay, Jac...
RECOMB
2003
Springer
16 years 6 months ago
Accurate detection of very sparse sequence motifs
Protein sequence alignments are more reliable the shorter the evolutionary distance. Here, we align distantly related proteins using many closely spaced intermediate sequences as ...
Andreas Heger, Michael Lappe, Liisa Holm
RECOMB
2001
Springer
16 years 6 months ago
A new approach to sequence comparison: normalized sequence alignment
The Smith-Waterman algorithm for local sequence alignment is one of the most important techniques in computational molecular biology. This ingenious dynamic programming approach w...
Abdullah N. Arslan, Ömer Egecioglu, Pavel A. ...
STOC
2007
ACM
102views Algorithms» more  STOC 2007»
16 years 6 months ago
Zero-knowledge from secure multiparty computation
A zero-knowledge proof allows a prover to convince a verifier of an assertion without revealing any further information beyond the fact that the assertion is true. Secure multipar...
Yuval Ishai, Eyal Kushilevitz, Rafail Ostrovsky, A...
STOC
2007
ACM
101views Algorithms» more  STOC 2007»
16 years 6 months ago
The price of privacy and the limits of LP decoding
This work is at the intersection of two lines of research. One line, initiated by Dinur and Nissim, investigates the price, in accuracy, of protecting privacy in a statistical dat...
Cynthia Dwork, Frank McSherry, Kunal Talwar
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