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» Conservativity in Structured Ontologies
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ASWC
2009
Springer
14 years 9 months ago
Repairing the Missing is-a Structure of Ontologies
Abstract. Developing ontologies is not an easy task and often the resulting ontologies are not consistent or complete. Such ontologies, although often useful, also lead to problems...
Patrick Lambrix, Qiang Liu 0002, He Tan
BMCBI
2006
117views more  BMCBI 2006»
14 years 11 months ago
Incorporating background frequency improves entropy-based residue conservation measures
Background: Several entropy-based methods have been developed for scoring sequence conservation in protein multiple sequence alignments. High scoring amino acid positions may corr...
Kai Wang, Ram Samudrala
NAR
2011
305views Computer Vision» more  NAR 2011»
14 years 2 months ago
CDD: a Conserved Domain Database for the functional annotation of proteins
NCBI’s Conserved Domain Database (CDD) is a resource for the annotation of protein sequences with the location of conserved domain footprints, and functional sites inferred from...
Aron Marchler-Bauer, Shennan Lu, John B. Anderson,...
BMCBI
2008
162views more  BMCBI 2008»
14 years 11 months ago
Improved identification of conserved cassette exons using Bayesian networks
Background: Alternative splicing is a major contributor to the diversity of eukaryotic transcriptomes and proteomes. Currently, large scale detection of alternative splicing using...
Rileen Sinha, Michael Hiller, Rainer Pudimat, Ulri...
AIMSA
2010
Springer
15 years 1 months ago
Towards Ontological Blending
We propose ontological blending as a new method for `creatively' combining ontologies. In contrast to other combination techniques that aim at integrating or assimilating cate...
Joana Hois, Oliver Kutz, Till Mossakowski, John A....