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BMCBI
2007
146views more  BMCBI 2007»
15 years 3 months ago
Bayesian hierarchical model for transcriptional module discovery by jointly modeling gene expression and ChIP-chip data
Background: Transcriptional modules (TM) consist of groups of co-regulated genes and transcription factors (TF) regulating their expression. Two high-throughput (HT) experimental ...
Xiangdong Liu, Walter J. Jessen, Siva Sivaganesan,...
BMCBI
2007
95views more  BMCBI 2007»
15 years 3 months ago
Methods for estimating human endogenous retrovirus activities from EST databases
Background: Human endogenous retroviruses (HERVs) are surviving traces of ancient retrovirus infections and now reside within the human DNA. Recently HERV expression has been dete...
Merja Oja, Jaakko Peltonen, Jonas Blomberg, Samuel...
GLOBECOM
2010
IEEE
15 years 1 months ago
Online Network Coding for Time-Division Duplexing
We study an online random linear network coding approach for time division duplexing (TDD) channels under Poisson arrivals. We model the system as a bulk-service queue with variabl...
Daniel Enrique Lucani, Muriel Médard, Milic...
SAC
2009
ACM
15 years 10 months ago
GTfold: a scalable multicore code for RNA secondary structure prediction
The prediction of the correct secondary structures of large RNAs is one of the unsolved challenges of computational molecular biology. Among the major obstacles is the fact that a...
Amrita Mathuriya, David A. Bader, Christine E. Hei...
EPIA
1999
Springer
15 years 7 months ago
Combinatorial Optimization in OPL Studio
OPL is a modeling language for mathematical programming and combinatorial optimization problems. It is the first modeling language to combine high-level algebraic and set notation...
Pascal Van Hentenryck, Laurent Michel, Philippe La...