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122
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AI
2007
Springer
15 years 2 months ago
Computational properties of argument systems satisfying graph-theoretic constraints
One difficulty that arises in abstract argument systems is that many natural questions regarding argument acceptability are, in general, computationally intractable having been c...
Paul E. Dunne
117
Voted
BMCBI
2010
145views more  BMCBI 2010»
15 years 2 months ago
JCoDA: a tool for detecting evolutionary selection
Background: The incorporation of annotated sequence information from multiple related species in commonly used databases (Ensembl, Flybase, Saccharomyces Genome Database, Wormbase...
Steven N. Steinway, Ruth Dannenfelser, Christopher...
141
Voted
BMCBI
2010
233views more  BMCBI 2010»
15 years 2 months ago
Odefy -- From discrete to continuous models
Background: Phenomenological information about regulatory interactions is frequently available and can be readily converted to Boolean models. Fully quantitative models, on the ot...
Jan Krumsiek, Sebastian Pölsterl, Dominik M. ...
115
Voted
BMCBI
2007
133views more  BMCBI 2007»
15 years 2 months ago
Semantic integration to identify overlapping functional modules in protein interaction networks
Background: The systematic analysis of protein-protein interactions can enable a better understanding of cellular organization, processes and functions. Functional modules can be ...
Young-Rae Cho, Woochang Hwang, Murali Ramanathan, ...
148
Voted
BMCBI
2010
142views more  BMCBI 2010»
15 years 2 months ago
Discover Protein Complexes in Protein-Protein Interaction Networks Using Parametric Local Modularity
Background: Recent advances in proteomic technologies have enabled us to create detailed protein-protein interaction maps in multiple species and in both normal and diseased cells...
Jongkwang Kim, Kai Tan