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113
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CSB
2005
IEEE
125views Bioinformatics» more  CSB 2005»
15 years 7 months ago
On Optimizing Distance-Based Similarity Search for Biological Databases
Similarity search leveraging distance-based index structures is increasingly being used for both multimedia and biological database applications. We consider distance-based indexi...
Rui Mao, Weijia Xu, Smriti R. Ramakrishnan, Glen N...
127
Voted
DATESO
2007
157views Database» more  DATESO 2007»
15 years 3 months ago
Index-Based Approach to Similarity Search in Protein and Nucleotide Databases
When searching databases of nucleotide or protein sequences, finding a local alignment of two sequences is one of the main tasks. Since the sizes of available databases grow const...
David Hoksza, Tomás Skopal
EVOW
2007
Springer
15 years 8 months ago
A Probabilistic Beam Search Approach to the Shortest Common Supersequence Problem
The Shortest Common Supersequence Problem (SCSP) is a well-known hard combinatorial optimization problem that formalizes many real world problems. This paper presents a novel rando...
Christian Blum, Carlos Cotta, Antonio J. Fern&aacu...
121
Voted
AIPS
2006
15 years 3 months ago
Exploiting the Power of Local Search in a Branch and Bound Algorithm for Job Shop Scheduling
This paper presents three techniques for using an iterated local search algorithm to improve the performance of a state-of-the-art branch and bound algorithm for job shop scheduli...
Matthew J. Streeter, Stephen F. Smith
128
Voted
CONSTRAINTS
2010
101views more  CONSTRAINTS 2010»
15 years 1 months ago
Evaluating the impact of AND/OR search on 0-1 integer linear programming
AND/OR search spaces accommodate advanced algorithmic schemes for graphical models which can exploit the structure of the model. We extend and evaluate the depth-first and best-fi...
Radu Marinescu 0002, Rina Dechter