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108
Voted
BMCBI
2004
14 years 9 months ago
2004
Background: Certain protein families are highly conserved across distantly related organisms and belong to large and functionally diverse superfamilies. The patterns of conservati...
91
Voted
RECOMB
2008
Springer
15 years 9 months ago
2008
Springer
Abstract. One phylogeny-based approach to horizontal gene transfer (HGT) detection entails comparing the topology of a gene tree to that of the species tree, and using their differ...
BMCBI
2005
14 years 9 months ago
2005
Background: The large amount of completely sequenced genomes allows genomic context analysis to predict reliable functional associations between prokaryotic proteins. Major method...
WABI
2009
Springer
15 years 4 months ago
2009
Springer
Background: Supertree methods comprise one approach to reconstructing large molecular phylogenies given multi-marker datasets: trees are estimated on each marker and then combined...
RECOMB
2004
Springer
15 years 9 months ago
2004
Springer
The Gibbs sampling method has been widely used for sequence analysis after it was successfully applied to the problem of identifying regulatory motif sequences upstream of genes. ...