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» Constraint Based Methods for Biological Sequence Analysis
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BMCBI
2006
164views more  BMCBI 2006»
15 years 5 months ago
BIOZON: a system for unification, management and analysis of heterogeneous biological data
Integration of heterogeneous data types is a challenging problem, especially in biology, where the number of databases and data types increase rapidly. Amongst the problems that o...
Aaron Birkland, Golan Yona
ICML
1999
IEEE
16 years 5 months ago
Detecting Motifs from Sequences
The problemofmultipleglobalcomparisonin familiesof biologicalsequences has been wellstudied. Fewer algorithms have been developed for identifying local consensus patterns or motif...
Yuh-Jyh Hu, Suzanne B. Sandmeyer, Dennis F. Kibler
183
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BMCBI
2006
166views more  BMCBI 2006»
15 years 5 months ago
bioNMF: a versatile tool for non-negative matrix factorization in biology
Background: In the Bioinformatics field, a great deal of interest has been given to Non-negative matrix factorization technique (NMF), due to its capability of providing new insig...
Alberto D. Pascual-Montano, Pedro Carmona-Saez, Mo...
ALMOB
2008
131views more  ALMOB 2008»
15 years 5 months ago
Fast algorithms for computing sequence distances by exhaustive substring composition
The increasing throughput of sequencing raises growing needs for methods of sequence analysis and comparison on a genomic scale, notably, in connection with phylogenetic tree reco...
Alberto Apostolico, Olgert Denas
BMCBI
2010
156views more  BMCBI 2010»
15 years 5 months ago
Extended morphological processing: a practical method for automatic spot detection of biological markers from microscopic images
Background: A reliable extraction technique for resolving multiple spots in light or electron microscopic images is essential in investigations of the spatial distribution and dyn...
Yoshitaka Kimori, Norio Baba, Nobuhiro Morone