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» Constraint Based Methods for Biological Sequence Analysis
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105
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COMAD
2008
15 years 1 months ago
REBMEC: Repeat Based Maximum Entropy Classifier for Biological Sequences
An important problem in biological data analysis is to predict the family of a newly discovered sequence like a protein or DNA sequence, using the collection of available sequence...
Pratibha Rani, Vikram Pudi
INFORMATICALT
2010
142views more  INFORMATICALT 2010»
14 years 10 months ago
Complexity Estimation of Genetic Sequences Using Information-Theoretic and Frequency Analysis Methods
The genetic information in cells is stored in DNA sequences, represented by a string of four letters, each corresponding to a definite type of nucleotides. Genomic DNA sequences a...
Robertas Damasevicius
122
Voted
AB
2008
Springer
15 years 6 months ago
Constructing a Knowledge Base for Gene Regulatory Dynamics by Formal Concept Analysis Methods
Johannes Wollbold, Reinhard Guthke, Bernhard Gante...
GECCO
2006
Springer
159views Optimization» more  GECCO 2006»
15 years 3 months ago
Identification of weak motifs in multiple biological sequences using genetic algorithm
Recognition of motifs in multiple unaligned sequences provides an insight into protein structure and function. The task of discovering these motifs is very challenging because mos...
Topon Kumar Paul, Hitoshi Iba
128
Voted
CPM
1993
Springer
154views Combinatorics» more  CPM 1993»
15 years 4 months ago
On Suboptimal Alignments of Biological Sequences
It is widely accepted that the optimal alignment between a pair of proteins or nucleic acid sequences that minimizes the edit distance may not necessarily re ect the correct biolog...
Dalit Naor, Douglas L. Brutlag