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» Constraint Based Methods for Biological Sequence Analysis
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BMCBI
2008
103views more  BMCBI 2008»
15 years 20 days ago
TOPS++FATCAT: Fast flexible structural alignment using constraints derived from TOPS+ Strings Model
Background: Protein structure analysis and comparison are major challenges in structural bioinformatics. Despite the existence of many tools and algorithms, very few of them have ...
Mallika Veeramalai, Yuzhen Ye, Adam Godzik
RECOMB
2003
Springer
16 years 26 days ago
Finding recurrent sources in sequences
Many genomic sequences and, more generally, (multivariate) time series display tremendous variability. However, often it is reasonable to assume that the sequence is actually gene...
Aristides Gionis, Heikki Mannila
92
Voted
DATE
2005
IEEE
125views Hardware» more  DATE 2005»
15 years 6 months ago
Hybrid BIST Based on Repeating Sequences and Cluster Analysis
We present a hybrid BIST approach that extracts the most frequently occurring sequences from deterministic test patterns; these extracted sequences are stored on-chip. We use clus...
Lei Li, Krishnendu Chakrabarty
103
Voted
RAS
2007
115views more  RAS 2007»
15 years 1 days ago
A variational method for the recovery of dense 3D structure from motion
The purpose of this study is to investigate a variational formulation of the problem of three-dimensional (3D) interpretation of temporal image sequences based on the 3D brightnes...
Hicham Sekkati, Amar Mitiche
BMCBI
2008
155views more  BMCBI 2008»
15 years 20 days ago
ComPath: comparative enzyme analysis and annotation in pathway/subsystem contexts
Background: Once a new genome is sequenced, one of the important questions is to determine the presence and absence of biological pathways. Analysis of biological pathways in a ge...
Kwangmin Choi, Sun Kim