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» Constraint Based Methods for Biological Sequence Analysis
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106
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BMEI
2008
IEEE
15 years 7 months ago
A New Approach for Tree Alignment Based on Local Re-Optimization
Multiple sequence alignment is the most fundamental task in bioinformatics and computational biology. In this paper, we present a new algorithm to conduct multiple sequences align...
Feng Yue, Jijun Tang
83
Voted
ANLP
1997
115views more  ANLP 1997»
15 years 1 months ago
An Automatic Scoring System For Advanced Placement Biology Essays
This paper describes a prceXype for automatically scoring College Board Advanced Placement (AP) Biology essays.I. The scoring technique used in this study was based on a previous ...
Jill Burstein, Susanne Wolff, Chi Lu, Randy M. Kap...
82
Voted
ISMB
2000
15 years 1 months ago
Integrative Analysis of Protein Interaction Data
We have developed a method for the integrative analysis of protein interaction data. It comprises clustering, visualization and data integration components. The method is generall...
Matthias Fellenberg, Kaj Albermann, Alfred Zollner...
92
Voted
RECOMB
2005
Springer
16 years 26 days ago
Consensus Folding of Unaligned RNA Sequences Revisited
As one of the earliest problems in computational biology, RNA secondary structure prediction (sometimes referred to as "RNA folding") problem has attracted attention agai...
Vineet Bafna, Haixu Tang, Shaojie Zhang
142
Voted
BMCBI
2005
198views more  BMCBI 2005»
15 years 14 days ago
Clustering protein sequences with a novel metric transformed from sequence similarity scores and sequence alignments with neural
Background: The sequencing of the human genome has enabled us to access a comprehensive list of genes (both experimental and predicted) for further analysis. While a majority of t...
Qicheng Ma, Gung-Wei Chirn, Richard Cai, Joseph D....