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» Constraint Based Methods for Biological Sequence Analysis
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87
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GIL
2009
14 years 10 months ago
A Software Package for Managing and Evaluating DNA Sequence and Microsatellite Data
Abstract: We have surveyed three molecular biology labs in Germany and Vietnam to evaluate practical problems in the management of molecular genetics data. These labs are generatin...
Truong Van Chi Cong, Zhivko Duchev, Eildert Groene...
90
Voted
BMCBI
2008
127views more  BMCBI 2008»
15 years 21 days ago
Human Pol II promoter recognition based on primary sequences and free energy of dinucleotides
Background: Promoter region plays an important role in determining where the transcription of a particular gene should be initiated. Computational prediction of eukaryotic Pol II ...
Jian-Yi Yang, Yu Zhou, Zu-Guo Yu, Vo Anh, Li-Qian ...
80
Voted
NAR
2000
128views more  NAR 2000»
15 years 11 days ago
The IMB Jena Image Library of Biological Macromolecules
The IMB Jena Image Library of Biological Macromolecules (http://www.imb-jena.de/IMAGE.html ) is aimed at a better dissemination of information on three-dimensional biopolymer stru...
Jan Reichert, Andreas Jabs, Peter Slickers, Jü...
141
Voted
BMCBI
2007
106views more  BMCBI 2007»
15 years 18 days ago
Modeling SAGE tag formation and its effects on data interpretation within a Bayesian framework
Background: Serial Analysis of Gene Expression (SAGE) is a high-throughput method for inferring mRNA expression levels from the experimentally generated sequence based tags. Stand...
Michael A. Gilchrist, Hong Qin, Russell L. Zaretzk...
RECOMB
2009
Springer
15 years 7 months ago
Reconstructing Histories of Complex Gene Clusters on a Phylogeny
Abstract. Clusters of genes that have evolved by repeated segmental duplication present difficult challenges throughout genomic analysis, from sequence assembly to functional analy...
Tomás Vinar, Brona Brejová, Giltae S...