We introduce two resource-bounded Baire category notions on small complexity classes such as P, QUASIPOLY, SUBEXP and PSPACE and on probabilistic classes such as BPP, which differ...
Background: Multiple sequence alignment is the foundation of many important applications in bioinformatics that aim at detecting functionally important regions, predicting protein...
Virpi Ahola, Tero Aittokallio, Mauno Vihinen, Esa ...
Background: Jumping alignments have recently been proposed as a strategy to search a given multiple sequence alignment A against a database. Instead of comparing a database sequen...
Anne-Kathrin Schultz, Ming Zhang, Thomas Leitner, ...
Background: The identification of statistically overrepresented sequences in the upstream regions of coregulated genes should theoretically permit the identification of potential ...
Jonathan M. Carlson, Arijit Chakravarty, Radhika S...
Support vector machines (SVMs) have proven to be a powerful technique for pattern classification. SVMs map inputs into a high dimensional space and then separate classes with a hy...
William M. Campbell, Joseph P. Campbell, Douglas A...