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CP
2001
Springer
15 years 2 months ago
A CLP Approach to the Protein Side-Chain Placement Problem
Abstract. Selecting conformations for side-chains is an important subtask in building three-dimensional protein models. Side-chain placement is a difficult problem because of the l...
Martin T. Swain, Graham J. L. Kemp
90
Voted
KDD
2003
ACM
142views Data Mining» more  KDD 2003»
15 years 10 months ago
Frequent-subsequence-based prediction of outer membrane proteins
A number of medically important disease-causing bacteria (collectively called Gram-negative bacteria) are noted for the extra "outer" membrane that surrounds their cell....
Rong She, Fei Chen 0002, Ke Wang, Martin Ester, Je...
CP
2003
Springer
15 years 2 months ago
Propagating N-Ary Rigid-Body Constraints
In this paper, we present an algorithm to propagate an n-ary constraint (with n greater than 2) specifying the relative positions of points in a three-dimensional rigid group. The ...
Ludwig Krippahl, Pedro Barahona
CORR
2010
Springer
124views Education» more  CORR 2010»
14 years 7 months ago
Lattice model refinement of protein structures
To find the best lattice model representation of a given full atom protein structure is a hard computational problem. Several greedy methods have been suggested where results are ...
Martin Mann, Alessandro Dal Palù
ML
2008
ACM
174views Machine Learning» more  ML 2008»
14 years 9 months ago
ALLPAD: approximate learning of logic programs with annotated disjunctions
In this paper we present the system ALLPAD for learning Logic Programs with Annotated Disjunctions (LPADs). ALLPAD modifies the previous system LLPAD in order to tackle real world ...
Fabrizio Riguzzi